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CAZyme Gene Cluster: MGYG000001643_21|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000001643_00962 | hypothetical protein |
CAZyme | 6906 | 8585 | - | CE6| CE4 |
| MGYG000001643_00963 | Pectate lyase L |
CAZyme | 8634 | 9977 | - | PL9| PL9_1 |
| MGYG000001643_00964 | Rhamnogalacturonan endolyase YesW |
CAZyme | 10006 | 12075 | - | PL11| PL11_1| CBM2 |
| MGYG000001643_00965 | hypothetical protein |
null | 12267 | 12971 | - | No domain |
| MGYG000001643_00966 | Beta-galactosidase |
CAZyme | 12976 | 15321 | - | GH2 |
| MGYG000001643_00967 | HTH-type transcriptional activator RhaR |
TF | 15551 | 17716 | + | HTH_AraC+HTH_AraC |
| MGYG000001643_00968 | hypothetical protein |
CAZyme | 17759 | 19045 | - | GH53 |
| MGYG000001643_00969 | putative lipoprotein YiaD |
TC | 19208 | 19912 | - | 9.B.186.1.3 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000001643_00962 | CE4_e36 | |
| MGYG000001643_00963 | PL9_e26|4.2.2.23 | pectin |
| MGYG000001643_00964 | PL11_e0|CBM2_e72|4.2.2.23 | pectin |
| MGYG000001643_00966 | GH2_e11|3.2.1.31 | beta-glucuronan |
| MGYG000001643_00968 | GH53_e17 |
Substrate predicted by dbCAN-PUL is pectin download this fig
